BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D10SP1|AL427623
(1005 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig197 1887 0.0
>3x_Contig197
Length = 1712
Score = 1887 bits (943), Expect = 0.0
Identities = 987/1007 (98%), Gaps = 2/1007 (0%)
Strand = Plus / Plus
Query: 1 agcatgggagaagatygtgcattattggaaatggcaggtcttgtagggcaacatcaaagt 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agcatgggagaagatcgtgcattattggaaatggcaggtcttgtagggcaacatcaaagc 679
Query: 61 ggtggatctatttaadatcgctaagtaaatattaaatatttgadattgcatagaattttt 120
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 ggtggatctatttaacatcgctaagtaaatattaaatatttgacattgcatagaattttt 739
Query: 121 aaattgatcatttcttgcttttcgtcttgttaatgagctttttcttaacgtgttttttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaattgatcatttcttgcttttcgtcttgttaatgagctttttcttaacgtgttttttta 799
Query: 181 ctttggtcttcctcttttcacgtttggcctcttttgtttcttgcttacgttgttttttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctttggtcttcctcttttcacgtttggcctcttttgtttcttgcttacgttgttttttag 859
Query: 241 catctttatcttcgtactttttt-cctttcagtggagtgtctttatcggagacccatcca 299
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 860 catctttatcttcgtactttttttcctttcagtggagtgtctttatcggagacccatcca 919
Query: 300 tcaccatcagaactatcgttagtttcatcactatcatcatcttcatctgatccagctatg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 tcaccatcagaactatcgttagtttcatcactatcatcatcttcatctgatccagctatg 979
Query: 360 tcatcttcattgatatccgttacgaggttagggagatcatcaccatctacgtcatcttcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 tcatcttcattgatatccgttacgaggttagggagatcatcaccatctacgtcatcttcc 1039
Query: 420 tcgtcatcagaagaagagagttcatattgctccgatgctgtgaaattttcggaatatttc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tcgtcatcagaagaagagagttcatattgctccgatgctgtgaaattttcggaatatttc 1099
Query: 480 ctgttttcattagcaattratgatttcagtrggtcaaatttaccatcagtgaatctatca 539
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1100 ctgttttcattagcaattaatgatttcagtaggtcaaatttaccatcagtgaatctatca 1159
Query: 540 aratctctttcctctaaaccacccaaatttcttatcaratgtraaggtctgaacacttca 599
| ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||
Sbjct: 1160 aaatctctttcctctaaaccacccaaatttcttatcaaatgtaaagatctgaacacttca 1219
Query: 600 tcttcagcttcgtcttcatcagtcaactttagaggtaaattgtcggcaacatatgtktct 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1220 tcttcagcttcgtcttcatcagtcaactttagaggtaaattgtcggcaacatatgtttct 1279
Query: 660 agatcatcgcttgakctgtratcacccttgartttgtctaagacctcactgatgatgaac 719
|||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1280 agatcatcgcttgatctgtaatcacccttgaatttgtctaagacctcactgatgatgaac 1339
Query: 720 tggaagatcacccgttcagggaaaatgtcaattcccaatttttggaaatatgagttaaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 tggaagatcacccgttcagggaaaatgtcaattcccaatttttggaaatatgagttaaca 1399
Query: 780 ttcttaatatccattcttaggaaatctagagacataggatgttctggttgtacggattgc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 ttcttaatatccattcttaggaaatctagagacataggatgttctggttgtacggattgc 1459
Query: 840 gaaacatcaataatataaagcttatcctcatgtacaatactattatactcactcaagtct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 gaaacatcaataatataaagcttatcctcatgtacaatactattatactcactcaagtct 1519
Query: 900 gcatgaactaagcgacatamctgatataacagtctcatgtacgctatcattaaattgtag 959
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 gcatgaactaagcgacatacctgatataacagtctcatgtacgctatcattaaattgtag 1579
Query: 960 taatgtttgatttcttctctatctttgtaagg-wggtctttaagcct 1005
|||||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 1580 taatgtttaatttcttctctatctttgtaaggatgatctttaagcct 1626
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8915
Number of Sequences: 1807
Number of extensions: 8915
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 1005
length of database: 10,358,551
effective HSP length: 16
effective length of query: 989
effective length of database: 10,329,639
effective search space: 10216012971
effective search space used: 10216012971
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)